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Caenorabditis Diversity Natural Resource

bam bioinformatics biology Caenorhabditis elegans fastq gatk-sv genetic maps genome genome wide association study genomic life sciences short read sequencing variant annotation vcf

Description

The Caenorhabditis Natural Diversity Resource (CaeNDR) is a data repository and analysis hub of wild strains of selfing Caenhorabditis species C. elegans, C. briggsae, and C. tropicalis from around the world to facilitate discovery of genetic variation across all three species through genome-wide association mappings to correlate genotype with phenotype and identify genetic variation underlying quantitative traits.

Update Frequency

Annually

License

All CaeNDR data is available under the MIT License. Use of the data should be cited in the usual way, with current details available at https://caendr.org/#citationModal

Documentation

https://github.com/awslabs/open-data-docs/tree/main/docs/caendr

Managed By

The Andersen Lab, Johns Hopkins University, Baltimore, MD, USA

See all datasets managed by The Andersen Lab, Johns Hopkins University, Baltimore, MD, USA.

Contact

https://caendr.org/about/contact-us

How to Cite

Caenorabditis Diversity Natural Resource was accessed on DATE from https://registry.opendata.aws/caendr.

Usage Examples

Tutorials
Publications

Resources on AWS

  • Description
    https://caendr.org/faq
    Resource type
    S3 Bucket
    Amazon Resource Name (ARN)
    arn:aws:s3:::caendr
    AWS Region
    us-east-1
    AWS CLI Access (No AWS account required)
    aws s3 ls --no-sign-request s3://caendr/

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