Integrative Analysis of Lung Adenocarcinoma in Environment and Genetics Lung cancer Etiology (Phase 2)
cancer epigenomics genomic life sciences STRIDES whole exome sequencing whole genome sequencing
Description
We performed whole genome sequencing and whole exome sequencing of 31 lung adenocarcinoma (LUAD) samples from the Environment And Genetics in Lung cancer Etiology (EAGLE) study. The EAGLE study is made available on AWS via the NIH STRIDES Initiative (https://aws.amazon.com/blogs/publicsector/aws-and-national-institutes-of-health-collaborate-to-accelerate-discoveries-with-strides-initiative/).
Update Frequency
Genomic Data Commons (GDC) is source of truth for this dataset; GDC offers monthly data releases, although this dataset may not be updated at every release.
License
(NIH Genomic Data Sharing Policy)[https://gdc.cancer.gov/access-data/data-access-policies]
Documentation
https://ftp.ncbi.nlm.nih.gov/dbgap/studies/phs001239/phs001239.v1.p1
Managed By
See all datasets managed by Center for Translational Data Science at The University of Chicago.
Contact
support@nci-gdc.datacommons.io
How to Cite
Integrative Analysis of Lung Adenocarcinoma in Environment and Genetics Lung cancer Etiology (Phase 2) was accessed on DATE from https://registry.opendata.aws/luad-eagle.
Usage Examples
Tools & Applications
Resources on AWS
-
- Description
- Whole Genome Sequencing, Whole Exome Sequencing
- Resource type
- S3 Bucket
- Amazon Resource Name (ARN)
arn:aws:s3:::gdc-cddp-eagle-1-phs001239-2-open- AWS Region
us-east-1- AWS CLI Access (No AWS account required)
aws s3 ls --no-sign-request s3://gdc-cddp-eagle-1-phs001239-2-open/