Synthea Coherent Data Set

bioinformatics csv dicom genomic health imaging life sciences medicine

Description

This is a synthetic data set that includes FHIR resources, DICOM images, genomic data, physiological data (i.e., ECGs), and simple clinical notes. FHIR links all the data types together.

Update Frequency

Rarely

License

Creative Commons Attribution 4.0 International License

Documentation

https://doi.org/10.3390/electronics11081199

Managed By

The MITRE Corporation

See all datasets managed by The MITRE Corporation.

Contact

synthea-list@groups.mitre.org

How to Cite

Synthea Coherent Data Set was accessed on DATE from https://registry.opendata.aws/synthea-coherent-data. Walonoski J, Hall D, Bates KM, Farris MH, Dagher J, Downs ME, Sivek RT, Wellner B, Gregorowicz A, Hadley M, Campion FX, Levine L, Wacome K, Emmer G, Kemmer A, Malik M, Hughes J, Granger E, Russell S. The “Coherent Data Set”: Combining Patient Data and Imaging in a Comprehensive Synthetic Health Record. Electronics. 2022; 11(8):1199. https://doi.org/10.3390/electronics11081199

Usage Examples

Publications

Resources on AWS

  • Description
    Synthetic data set that includes FHIR resources, DICOM images, genomic data, physiological data (i.e., ECGs), and simple clinical notes. FHIR links all the data types together. Data is available as single zip archive or as individual files within an unzipped folder.
    Resource type
    S3 Bucket
    Amazon Resource Name (ARN)
    arn:aws:s3:::synthea-open-data/coherent/
    AWS Region
    us-east-1
    AWS CLI Access (No AWS account required)
    aws s3 ls --no-sign-request s3://synthea-open-data/coherent/

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